Bioinformatics

БесплатноНе проверен

MCP-Server für Bioinformatik-Daten — Gene, Proteine, PubMed-Literatur, Varianten und Sequenzen via NCBI & UniProt

Описание

MCP-Server für Bioinformatik-Daten — Gene, Proteine, PubMed-Literatur, Varianten und Sequenzen via NCBI & UniProt

README

Bioinformatics and life science data for AI agents — gene search, protein structures, clinical variants, PubMed literature, and DNA sequences via NCBI and UniProt.

PyPI version License: MIT

No API key required. 10 tools covering 6 data sources (NCBI Gene, ClinVar, Taxonomy, PubMed, Sequences, UniProt).

Quick Start

pip install bioinformatics-mcp-server

{
  "mcpServers": {
    "bioinformatics": {
      "command": "uvx",
      "args": ["bioinformatics-mcp-server"]
    }
  }
}

What Can You Do?

Ask your AI agent things like:

"Search for genes related to breast cancer"
"What clinical variants are known for BRCA1?"
"Find recent PubMed papers about CRISPR gene editing"
"Get the protein structure of human insulin from UniProt"
"What species does this organism belong to?"

10 Tools

NCBI (5 tools)

Tool	What it does
`search_genes`	Search genes by symbol, name, or function
`get_gene_details`	Full gene info by NCBI Gene ID
`search_clinvar_variants`	Clinical variants and mutations
`get_taxonomy`	Taxonomic classification of organisms
`get_ncbi_sequence`	DNA/protein sequences (FASTA/GenBank)

UniProt (2 tools)

Tool	What it does
`search_proteins`	Search proteins by name, gene, or organism
`get_protein_details`	Protein details by UniProt accession

PubMed (3 tools)

Tool	What it does
`search_pubmed`	Search biomedical literature
`get_pubmed_abstract`	Full abstract of a PubMed article
`get_pubmed_citations`	Articles citing a specific publication

Related Servers

medical-data-mcp-server — WHO health data
crossref-academic-mcp-server — Academic papers via Crossref

License

MIT

from github.com/AiAgentKarl/bioinformatics-mcp-server

Установить Bioinformatics в Claude Desktop, Claude Code, Cursor

Рекомендуется · одна команда, все IDE

unyly install bioinformatics

Ставит в Claude Desktop, Claude Code, Cursor и VS Code — сам разбирается с npx, uvx и сборкой из исходников.

Впервые? Поставь CLI: curl -fsSL https://unyly.org/install | sh

Или настроить вручную

Выполни в терминале:

claude mcp add bioinformatics -- uvx bioinformatics-mcp-server

Пошаговые гайды: как установить Bioinformatics

Установить Bioinformatics в Claude Desktop Установить Bioinformatics в Claude Code Установить Bioinformatics в Cursor Установить Bioinformatics в VS Code

FAQ

Bioinformatics MCP бесплатный?

Да, Bioinformatics MCP бесплатный — установка в пару кликов через Unyly без оплаты.

Нужен ли API-ключ для Bioinformatics?

Нет, Bioinformatics работает без API-ключей и переменных окружения.

Bioinformatics — hosted или self-hosted?

Self-hosted: сервер запускается локально на твоей машине командой из раздела установки.

Как установить Bioinformatics в Claude Desktop, Claude Code или Cursor?

Открой Bioinformatics на unyly.org, выбери вкладку своего клиента (Claude Desktop, Claude Code, Cursor) и нажми Install — конфиг сгенерируется автоматически, без правки JSON.

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